1.修改prometheus-prometheus.yaml

apiVersion: monitoring.coreos.com/v1
kind: Prometheus
metadata:
  labels:
    prometheus: k8s
  name: k8s
  namespace: monitoring
spec:
  alerting:
    alertmanagers:
    - name: alertmanager-main
      namespace: monitoring
      port: web
  baseImage: hub-dev.example.com/prometheus/prometheus
  nodeSelector:
    beta.kubernetes.io/os: linux
  replicas: 2
  resources:
    requests:
      memory: 400Mi
  ruleSelector:
    matchLabels:
      prometheus: k8s
      role: alert-rules
  serviceAccountName: prometheus-k8s
    #下面注释掉之后 prometheus-operator就不会再生成prometheus的默认配置了
  #serviceMonitorSelector:
  #  matchExpressions:
  #    - key: k8s-app
  #      operator: Exists
  version: v2.2.1

2.增加自定义prometheus的配置文件

• 编辑prometheus.config.yaml

global:
  scrape_interval: 30s
  scrape_timeout: 10s
  evaluation_interval: 30s
  external_labels:
    prometheus: monitoring/k8s
    prometheus_replica: prometheus-k8s-0
alerting:
  alert_relabel_configs:
  - separator: ;
    regex: prometheus_replica
    replacement: $1
    action: labeldrop
  alertmanagers:
  - kubernetes_sd_configs:
    - api_server: null
      role: endpoints
      namespaces:
        names:
        - monitoring
    scheme: http
    path_prefix: /
    timeout: 10s
    relabel_configs:
    - source_labels: [__meta_kubernetes_service_name]
      separator: ;
      regex: alertmanager-main
      replacement: $1
      action: keep
    - source_labels: [__meta_kubernetes_endpoint_port_name]
      separator: ;
      regex: web
      replacement: $1
      action: keep
rule_files:
- /etc/prometheus/rules/*.yaml
scrape_configs:
- job_name: 'kubernetes-apiservers'
  kubernetes_sd_configs:
  - role: endpoints
  scheme: https
  tls_config:
    ca_file: /var/run/secrets/kubernetes.io/serviceaccount/ca.crt
  bearer_token_file: /var/run/secrets/kubernetes.io/serviceaccount/token
  relabel_configs:
  - source_labels: [__meta_kubernetes_namespace, __meta_kubernetes_service_name, __meta_kubernetes_endpoint_port_name]
    action: keep
    regex: default;kubernetes;https

- job_name: 'kubernetes-nodes'
  kubernetes_sd_configs:
  - role: node
  scheme: https
  tls_config:
    ca_file: /var/run/secrets/kubernetes.io/serviceaccount/ca.crt
  bearer_token_file: /var/run/secrets/kubernetes.io/serviceaccount/token
  relabel_configs:
  - action: labelmap
    regex: __meta_kubernetes_node_label_(.+)
  - target_label: __address__
    replacement: kubernetes.default.svc:443
  - source_labels: [__meta_kubernetes_node_name]
    regex: (.+)
    target_label: __metrics_path__
    replacement: /api/v1/nodes/${1}/proxy/metrics

- job_name: 'kubernetes-cadvisor'
  kubernetes_sd_configs:
  - role: node
  scheme: https
  tls_config:
    ca_file: /var/run/secrets/kubernetes.io/serviceaccount/ca.crt
  bearer_token_file: /var/run/secrets/kubernetes.io/serviceaccount/token
  relabel_configs:
  - action: labelmap
    regex: __meta_kubernetes_node_label_(.+)
  - target_label: __address__
    replacement: kubernetes.default.svc:443
  - source_labels: [__meta_kubernetes_node_name]
    regex: (.+)
    target_label: __metrics_path__
    replacement: /api/v1/nodes/${1}/proxy/metrics/cadvisor

- job_name: 'kubernetes-service-endpoints'
  kubernetes_sd_configs:
  - role: endpoints
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_annotation_prometheus_io_scrape]
    action: keep
    regex: true
  - source_labels: [__meta_kubernetes_service_annotation_prometheus_io_scheme]
    action: replace
    target_label: __scheme__
    regex: (https?)
  - source_labels: [__meta_kubernetes_service_annotation_prometheus_io_path]
    action: replace
    target_label: __metrics_path__
    regex: (.+)
  - source_labels: [__address__, __meta_kubernetes_service_annotation_prometheus_io_port]
    action: replace
    target_label: __address__
    regex: ([^:]+)(?::\d+)?;(\d+)
    replacement: $1:$2
  - action: labelmap
    regex: __meta_kubernetes_service_label_(.+)
  - source_labels: [__meta_kubernetes_namespace]
    action: replace
    target_label: kubernetes_namespace
  - source_labels: [__meta_kubernetes_service_name]
    action: replace
    target_label: kubernetes_name

- job_name: 'kubernetes-services'
  kubernetes_sd_configs:
  - role: service
  metrics_path: /probe
  params:
    module: [http_2xx]
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_annotation_prometheus_io_probe]
    action: keep
    regex: true
  - source_labels: [__address__]
    target_label: __param_target
  - target_label: __address__
    replacement: blackbox-exporter.example.com:9115
  - source_labels: [__param_target]
    target_label: instance
  - action: labelmap
    regex: __meta_kubernetes_service_label_(.+)
  - source_labels: [__meta_kubernetes_namespace]
    target_label: kubernetes_namespace
  - source_labels: [__meta_kubernetes_service_name]
    target_label: kubernetes_name

- job_name: 'kubernetes-ingresses'
  kubernetes_sd_configs:
  - role: ingress
  relabel_configs:
  - source_labels: [__meta_kubernetes_ingress_annotation_prometheus_io_probe]
    action: keep
    regex: true
  - source_labels: [__meta_kubernetes_ingress_scheme,__address__,__meta_kubernetes_ingress_path]
    regex: (.+);(.+);(.+)
    replacement: ${1}://${2}${3}
    target_label: __param_target
  - target_label: __address__
    replacement: blackbox-exporter.example.com:9115
  - source_labels: [__param_target]
    target_label: instance
  - action: labelmap
    regex: __meta_kubernetes_ingress_label_(.+)
  - source_labels: [__meta_kubernetes_namespace]
    target_label: kubernetes_namespace
  - source_labels: [__meta_kubernetes_ingress_name]
    target_label: kubernetes_name

- job_name: 'kubernetes-pods'
  kubernetes_sd_configs:
  - role: pod
  relabel_configs:
  - source_labels: [__meta_kubernetes_pod_annotation_prometheus_io_scrape]
    action: keep
    regex: true
  - source_labels: [__meta_kubernetes_pod_annotation_prometheus_io_path]
    action: replace
    target_label: __metrics_path__
    regex: (.+)
  - source_labels: [__address__, __meta_kubernetes_pod_annotation_prometheus_io_port]
    action: replace
    regex: ([^:]+)(?::\d+)?;(\d+)
    replacement: $1:$2
    target_label: __address__
  - action: labelmap
    regex: __meta_kubernetes_pod_label_(.+)
  - source_labels: [__meta_kubernetes_namespace]
    action: replace
    target_label: kubernetes_namespace
  - source_labels: [__meta_kubernetes_pod_name]
    action: replace
    target_label: kubernetes_pod_name

- job_name: 'kubernetes-nodes-physical'
  kubernetes_sd_configs:
  - role: node
  relabel_configs:
  - action: labelmap
    regex: __meta_kubernetes_node_label_(.+)
  - source_labels: [__meta_kubernetes_role]
    action: replace
    target_label: kubernetes_role
  - source_labels: [__address__]
    regex: '(.*):10250'
    replacement: '${1}:9100'
    target_label: __address__
- job_name: monitoring/alertmanager/0
  scrape_interval: 30s
  scrape_timeout: 10s
  metrics_path: /metrics
  scheme: http
  kubernetes_sd_configs:
  - api_server: null
    role: endpoints
    namespaces:
      names:
      - monitoring
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_label_alertmanager]
    separator: ;
    regex: main
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_endpoint_port_name]
    separator: ;
    regex: web
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_namespace]
    separator: ;
    regex: (.*)
    target_label: namespace
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_pod_name]
    separator: ;
    regex: (.*)
    target_label: pod
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: service
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: job
    replacement: ${1}
    action: replace
  - separator: ;
    regex: (.*)
    target_label: endpoint
    replacement: web
    action: replace
- job_name: monitoring/kube-apiserver/0
  scrape_interval: 30s
  scrape_timeout: 10s
  metrics_path: /metrics
  scheme: https
  kubernetes_sd_configs:
  - api_server: null
    role: endpoints
    namespaces:
      names:
      - default
  bearer_token_file: /var/run/secrets/kubernetes.io/serviceaccount/token
  tls_config:
    ca_file: /var/run/secrets/kubernetes.io/serviceaccount/ca.crt
    server_name: kubernetes
    insecure_skip_verify: false
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_label_component]
    separator: ;
    regex: apiserver
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_service_label_provider]
    separator: ;
    regex: kubernetes
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_endpoint_port_name]
    separator: ;
    regex: https
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_namespace]
    separator: ;
    regex: (.*)
    target_label: namespace
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_pod_name]
    separator: ;
    regex: (.*)
    target_label: pod
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: service
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: job
    replacement: ${1}
    action: replace
  - source_labels: [__meta_kubernetes_service_label_component]
    separator: ;
    regex: (.+)
    target_label: job
    replacement: ${1}
    action: replace
  - separator: ;
    regex: (.*)
    target_label: endpoint
    replacement: https
    action: replace
- job_name: monitoring/kube-state-metrics/0
  honor_labels: true
  scrape_interval: 30s
  scrape_timeout: 10s
  metrics_path: /metrics
  scheme: https
  kubernetes_sd_configs:
  - api_server: null
    role: endpoints
    namespaces:
      names:
      - monitoring
  bearer_token_file: /var/run/secrets/kubernetes.io/serviceaccount/token
  tls_config:
    insecure_skip_verify: true
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: kube-state-metrics
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_endpoint_port_name]
    separator: ;
    regex: https-main
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_namespace]
    separator: ;
    regex: (.*)
    target_label: namespace
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_pod_name]
    separator: ;
    regex: (.*)
    target_label: pod
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: service
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: job
    replacement: ${1}
    action: replace
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: (.+)
    target_label: job
    replacement: ${1}
    action: replace
  - separator: ;
    regex: (.*)
    target_label: endpoint
    replacement: https-main
    action: replace
- job_name: monitoring/kube-state-metrics/1
  scrape_interval: 30s
  scrape_timeout: 10s
  metrics_path: /metrics
  scheme: https
  kubernetes_sd_configs:
  - api_server: null
    role: endpoints
    namespaces:
      names:
      - monitoring
  bearer_token_file: /var/run/secrets/kubernetes.io/serviceaccount/token
  tls_config:
    insecure_skip_verify: true
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: kube-state-metrics
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_endpoint_port_name]
    separator: ;
    regex: https-self
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_namespace]
    separator: ;
    regex: (.*)
    target_label: namespace
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_pod_name]
    separator: ;
    regex: (.*)
    target_label: pod
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: service
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: job
    replacement: ${1}
    action: replace
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: (.+)
    target_label: job
    replacement: ${1}
    action: replace
  - separator: ;
    regex: (.*)
    target_label: endpoint
    replacement: https-self
    action: replace
- job_name: monitoring/kubelet/0
  scrape_interval: 30s
  scrape_timeout: 10s
  metrics_path: /metrics
  scheme: https
  kubernetes_sd_configs:
  - api_server: null
    role: endpoints
    namespaces:
      names:
      - kube-system
  bearer_token_file: /var/run/secrets/kubernetes.io/serviceaccount/token
  tls_config:
    insecure_skip_verify: true
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: kubelet
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_endpoint_port_name]
    separator: ;
    regex: https-metrics
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_namespace]
    separator: ;
    regex: (.*)
    target_label: namespace
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_pod_name]
    separator: ;
    regex: (.*)
    target_label: pod
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: service
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: job
    replacement: ${1}
    action: replace
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: (.+)
    target_label: job
    replacement: ${1}
    action: replace
  - separator: ;
    regex: (.*)
    target_label: endpoint
    replacement: https-metrics
    action: replace
- job_name: monitoring/kubelet/1
  honor_labels: true
  scrape_interval: 30s
  scrape_timeout: 10s
  metrics_path: /metrics/cadvisor
  scheme: https
  kubernetes_sd_configs:
  - api_server: null
    role: endpoints
    namespaces:
      names:
      - kube-system
  bearer_token_file: /var/run/secrets/kubernetes.io/serviceaccount/token
  tls_config:
    insecure_skip_verify: true
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: kubelet
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_endpoint_port_name]
    separator: ;
    regex: https-metrics
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_namespace]
    separator: ;
    regex: (.*)
    target_label: namespace
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_pod_name]
    separator: ;
    regex: (.*)
    target_label: pod
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: service
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: job
    replacement: ${1}
    action: replace
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: (.+)
    target_label: job
    replacement: ${1}
    action: replace
  - separator: ;
    regex: (.*)
    target_label: endpoint
    replacement: https-metrics
    action: replace
- job_name: monitoring/prometheus/0
  scrape_interval: 30s
  scrape_timeout: 10s
  metrics_path: /metrics
  scheme: http
  kubernetes_sd_configs:
  - api_server: null
    role: endpoints
    namespaces:
      names:
      - monitoring
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_label_prometheus]
    separator: ;
    regex: k8s
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_endpoint_port_name]
    separator: ;
    regex: web
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_namespace]
    separator: ;
    regex: (.*)
    target_label: namespace
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_pod_name]
    separator: ;
    regex: (.*)
    target_label: pod
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: service
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: job
    replacement: ${1}
    action: replace
  - separator: ;
    regex: (.*)
    target_label: endpoint
    replacement: web
    action: replace
- job_name: monitoring/prometheus-operator/0
  scrape_interval: 30s
  scrape_timeout: 10s
  metrics_path: /metrics
  scheme: http
  kubernetes_sd_configs:
  - api_server: null
    role: endpoints
    namespaces:
      names:
      - monitoring
  relabel_configs:
  - source_labels: [__meta_kubernetes_service_label_k8s_app]
    separator: ;
    regex: prometheus-operator
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_endpoint_port_name]
    separator: ;
    regex: http
    replacement: $1
    action: keep
  - source_labels: [__meta_kubernetes_namespace]
    separator: ;
    regex: (.*)
    target_label: namespace
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_pod_name]
    separator: ;
    regex: (.*)
    target_label: pod
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: service
    replacement: $1
    action: replace
  - source_labels: [__meta_kubernetes_service_name]
    separator: ;
    regex: (.*)
    target_label: job
    replacement: ${1}
    action: replace
  - separator: ;
    regex: (.*)
    target_label: endpoint
    replacement: http
    action: replace

• 3.因为prometheus-operator 默认是将一个加密字典mount到了prometheus实例里面，所以这里配置生成加密字典的yaml文件，

apiVersion: v1
data:
  prometheus.yaml: base64秘文
kind: Secret
metadata:
  name: prometheus-k8s
  namespace: monitoring
type: Opaque

• 4.将配置转换成加密的base64密文的shell脚本

#!/bin/bash
echo -e  "\n"
if [ -z $1 ]
    then
        secert=$(/usr/bin/cat ./prometheus.config.yaml  | /usr/bin/base64 -w 0)
    else
        secert=$(/usr/bin/cat $1  | /usr/bin/base64 -w 0)
fi
sed -re 's/(\s+prometheus.yaml:\s+)[^:]*$/\1 512/' prometheus-secret.yaml >prometheus-secret-new.yaml
sed -i "s~512~${secert}~" prometheus-secret-new.yaml

• 5.应用到k8s集群里

kubectl replace -f prometheus-secret-new.yaml